Top 40 InterPro Domains in the Ensembl Database

Ground Squirrel (Spermophilus tridecemlineatus)

No.

Interpro name	Number of genes	Number of Ensembl hits	No.	Interpro name	Number of genes	Number of Ensembl hits
1	IPR000694 Proline-rich region	507	4099	21	IPR003598 Immunoglobulin subtype 2	57	621
2	IPR000276 Rhodopsin-like GPCR superfamily	443	6104	22	IPR000742 EGF-like, type 3	53	1163
3	IPR000719 Protein kinase	310	3249	23	IPR001254 Peptidase S1 and S6, chymotrypsin/Hap	53	335
4	IPR003596 Immunoglobulin V-set, subgroup	190	1707	24	IPR001128 Cytochrome P450	52	858
5	IPR001680 WD-40 repeat	166	2092	25	IPR001440 Tetratricopeptide TPR_1	51	841
6	IPR000504 RNA-binding region RNP-1 (RNA recognition motif)	137	825	26	IPR007087 Zinc finger, C2H2-type	51	508
7	IPR001806 Ras GTPase	96	938	27	IPR001478 PDZ/DHR/GLGF	48	380
8	IPR002110 Ankyrin	89	1344	28	IPR000104 Antifreeze protein, type I	47	391
9	IPR000210 BTB	88	1437	29	IPR000198 RhoGAP	45	373
10	IPR000008 C2 calcium-dependent membrane targeting	87	911	30	IPR000315 Zinc finger, B-box	42	585
11	IPR001909 KRAB box	86	2758	31	IPR000884 Thrombospondin, type I	41	704
12	IPR001781 LIM, zinc-binding	82	2725	32	IPR001664 Intermediate filament protein	41	263
13	IPR001841 Zinc finger, RING-type	77	451	33	IPR000219 DH	41	378
14	IPR001611 Leucine-rich repeat	74	751	34	IPR001356 Homeobox	40	265
15	IPR000533 Tropomyosin	68	428	35	IPR002126 Cadherin	40	932
16	IPR002048 Calcium-binding EF-hand	67	428	36	IPR002198 Short-chain dehydrogenase/reductase SDR	39	334
17	IPR007086 Zinc finger, C2H2-subtype	66	1464	37	IPR000215 Proteinase inhibitor I4, serpin	39	187
18	IPR000048 IQ calmodulin-binding region	66	944	38	IPR000886 Endoplasmic reticulum targeting sequence	39	196
19	IPR000047 Helix-turn-helix motif, lambda-like repressor	62	703	39	IPR000108 Neutrophil cytosol factor 2	37	848
20	IPR000152 Aspartic acid and asparagine hydroxylation site	57	3930	40	IPR000571 Zinc finger, CCCH-type	37	215

View top 500 InterPro hits (large table)

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